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林麝肠源和圈舍土源大肠埃希菌的分离鉴定及其耐药基因的检测
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引用本文:李怡瑾,邱 宇,田思璐,周剑婧,曹宇恒,赵 位,喻 东,杨 威,罗 燕,程建国.林麝肠源和圈舍土源大肠埃希菌的分离鉴定及其耐药基因的检测[J].西北农业学报,2020,30(10):1492~1501
DOI:10.7606/j.issn.1004-1389.2020.10.006
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作者单位
李怡瑾,邱 宇,田思璐,周剑婧,曹宇恒,赵 位,喻 东,杨 威,罗 燕,程建国 (1.四川农业大学 动物医学院成都 6111302.四川养麝研究所四川都江堰 611800) 
基金项目:四川省科技厅2020年四川省科研院所科技成果转化资金项目(2020JDZH0024);四川农业大学本科生科研兴趣项目(2019176)。
中文摘要:为了解林麝肠源大肠埃希菌耐药表型和耐药基因及其与圈舍土源大肠埃希菌的关系。从茂县、都江堰、理县、陕西、泸定、汉源6个林麝养殖场采集66份林麝新鲜粪便及养殖场20份土壤样本,通过分离纯化、生化试验、16S rRNA基因序列分析鉴定,得到59株林麝肠源大肠埃希菌和12株土源大肠埃希菌,并对其进行药敏试验。据其结果,设计相关12对引物,采用PCR方法对所有菌株的耐药基因进行检测。药敏试验显示,林麝肠源大肠埃希菌对青霉素、庆大霉素、链霉素、四环素、氯霉素具有较强耐药性,在所有菌株中所占比例分别为81.36%、5.08%、13.56%、20.34%和6.78%;土源大肠埃希菌对除氯霉素以外的同种类药物具有较强耐药性,在所有菌株中所占比例为91.67%、16.67%、16.67%、25.00%。PCR结果显示,林麝肠源大肠埃希菌7个基因检出率较高;而土源大肠埃希菌3个基因检出率较高。对于同一种耐药基因而言,林麝肠源大肠埃希菌耐药基因检出率普遍高于土源大肠埃希菌,但从耐药基因检测整体结果来看,林麝肠源大肠埃希菌与土源大肠埃希菌又存在一致性,这说明二者之间可能存在某种相互影响的关系。
中文关键词:林麝  肠源大肠埃希菌  土源大肠埃希菌  耐药表型  耐药基因
 
Isolation,Identification and Detection of Drug-resistant Genes of Escherichia coli from Intestinal Tract of Forest Musk Deer and Soil in Captive House
Abstract:In order to understand the drug resistance phenotype and drug resistance gene of Escherichia coli(E.coli) in the intestinal tract of forest musk deer and its relationship with E.coli in the soil environment of colony house. 66 fresh forest musk deer feces and 20 soil samples were collected from theforest musk deer farms in Maoxian, Dujiangyan, Lixian, Shaanxi, Luding and Hanyuan.By isolation, purification, biochemical test and 16S rRNA gene sequence analysis, 59 strains of enterogenic E.coli of forest musk deer and 12 strains E.coli were isolated from the captive house soil, and its drug sensitivity test was carried out. According to the result of drug sensitivity test, the relevant 12 primer pairs were designed, and the resistance genes of all strains were detected by polymerase chain reaction(PCR). The result indicated that the enterogenic E.coli had strong resistance to penicillin, gentamicin, streptomycin, tetracycline and chloramphenico,the proportion of all strains was 81.36%, 5.08%, 13.56%, 20.34% and 6.78%, respectively. E.coli from the captive house soil showed strong resistance to the same kind of drug except for chloramphenico, and the proportion of all strains was 91.67%, 16.67%, 16.67%, 25.00%, respectively. In enterogenic E.coli, 7 genes’ detection rates were high,while ,in soil E.coli,detection rates of 3 genes’were high. For the same resistance gene, the detection rate of enterogenic E.coli resistance gene was generally higher than that of soil E.coli, for overall results of drug resistance gene detection, there was a consistency between forest musk deer enterogenic E.coli and soil E.coli, which indicated that there may be some interactions.
keywords:Forest musk deer  Enterogenic E.coli  Soil E.coli  Drug resistance phenotype  Drug resistance genotype
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